Skip to main content
Advertisement

Main menu

  • Home
  • Content
    • Current Issue
    • Accepted Manuscripts
    • Article Preview
    • Past Issue Archive
    • AJNR Case Collection
    • Case of the Week Archive
    • Classic Case Archive
    • Case of the Month Archive
  • Special Collections
    • Spinal CSF Leak Articles (Jan 2020-June 2024)
    • 2024 AJNR Journal Awards
    • Most Impactful AJNR Articles
  • Multimedia
    • AJNR Podcast
    • AJNR Scantastics
    • Video Articles
  • For Authors
    • Submit a Manuscript
    • Author Policies
    • Fast publishing of Accepted Manuscripts
    • Graphical Abstract Preparation
    • Manuscript Submission Guidelines
    • Imaging Protocol Submission
    • Submit a Case for the Case Collection
  • About Us
    • About AJNR
    • Editorial Board
  • More
    • Become a Reviewer/Academy of Reviewers
    • Subscribers
    • Permissions
    • Alerts
    • Feedback
    • Advertisers
    • ASNR Home
  • Other Publications
    • ajnr

User menu

  • Alerts
  • Log in

Search

  • Advanced search
American Journal of Neuroradiology
American Journal of Neuroradiology

American Journal of Neuroradiology

ASHNR American Society of Functional Neuroradiology ASHNR American Society of Pediatric Neuroradiology ASSR
  • Alerts
  • Log in

Advanced Search

  • Home
  • Content
    • Current Issue
    • Accepted Manuscripts
    • Article Preview
    • Past Issue Archive
    • AJNR Case Collection
    • Case of the Week Archive
    • Classic Case Archive
    • Case of the Month Archive
  • Special Collections
    • Spinal CSF Leak Articles (Jan 2020-June 2024)
    • 2024 AJNR Journal Awards
    • Most Impactful AJNR Articles
  • Multimedia
    • AJNR Podcast
    • AJNR Scantastics
    • Video Articles
  • For Authors
    • Submit a Manuscript
    • Author Policies
    • Fast publishing of Accepted Manuscripts
    • Graphical Abstract Preparation
    • Manuscript Submission Guidelines
    • Imaging Protocol Submission
    • Submit a Case for the Case Collection
  • About Us
    • About AJNR
    • Editorial Board
  • More
    • Become a Reviewer/Academy of Reviewers
    • Subscribers
    • Permissions
    • Alerts
    • Feedback
    • Advertisers
    • ASNR Home
  • Follow AJNR on Twitter
  • Visit AJNR on Facebook
  • Follow AJNR on Instagram
  • Join AJNR on LinkedIn
  • RSS Feeds

Welcome to the new AJNR, Updated Hall of Fame, and more. Read the full announcements.


AJNR is seeking candidates for the position of Associate Section Editor, AJNR Case Collection. Read the full announcement.

 

Getting new auth cookie, if you see this message a lot, tell someone!
Research ArticleBrain
Open Access

Quantitative Susceptibility Mapping of Human Brain at 3T: A Multisite Reproducibility Study

P.-Y. Lin, T.-C. Chao and M.-L. Wu
American Journal of Neuroradiology March 2015, 36 (3) 467-474; DOI: https://doi.org/10.3174/ajnr.A4137
P.-Y. Lin
aFrom the Department of Computer Science and Information Engineering (P.-Y.L., T.-C.C., M.-L.W.)
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
T.-C. Chao
aFrom the Department of Computer Science and Information Engineering (P.-Y.L., T.-C.C., M.-L.W.)
bInstitute of Medical Informatics (T.-C.C., M.-L.W.), National Cheng Kung University, Tainan, Taiwan.
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
M.-L. Wu
aFrom the Department of Computer Science and Information Engineering (P.-Y.L., T.-C.C., M.-L.W.)
bInstitute of Medical Informatics (T.-C.C., M.-L.W.), National Cheng Kung University, Tainan, Taiwan.
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • Article
  • Figures & Data
  • Info & Metrics
  • Responses
  • References
  • PDF
Loading

Article Figures & Data

Figures

  • Tables
  • Fig 1.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 1.

    Measured susceptibility versus the phantom susceptibility values. Good linearity exists between measured susceptibility values and phantom susceptibility values in 6 test tubes of the phantom. The regression line has a slope of 0.91.

  • Fig 2.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 2.

    Comparison of iterative QSM and deterministic QSM in a sagittal view of the phantom. The susceptibility map from deterministic QSM presents a higher level of streaking artifacts as indicated by the white arrows.

  • Fig 3.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 3.

    Susceptibility maps reconstructed by iterative QSM (A) and deterministic QSM (B) in 3 different views. Susceptibility maps from both methods are very similar in contrast and brain structures. C, The difference images of A and B. Note that most streaking patterns in C are centered at locations with high susceptibility values, such as the sagittal sinus and regions close to the skull base, as indicated by white arrows.

  • Fig 4.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 4.

    Susceptibility maps reconstructed by using iterative QSM with data from 3 scanners at sites A, B, and C. A–C, Good consistency in brain structures and susceptibility values is shown. Some difference is found at the frontal lobe as indicated by white arrows in B and C, likely due to different shimming conditions in this region.

  • Fig 5.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 5.

    Within-site (left) and cross-site (right) imprecisions shown as SDs from multiple measurements on the 9 subjects by using the iterative QSM algorithm. The P values shown in the subplot titles stand for the difference between within-site and cross-site precisions (paired Student t test). For all 5 regions, cross-site variations are not larger than within-site variations. The putamen and globus pallidus show the highest precision, followed by the caudate nucleus, red nucleus, and substantia nigra.

  • Fig 6.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 6.

    Within-site (left) and cross-site (right) imprecisions shown as SDs from multiple measurements on the 9 subjects by using the deterministic QSM algorithm. The P values shown in the subplot titles stand for the difference between within-site and cross-site precisions (paired Student t test). For all 5 regions, cross-site variations are not larger than within-site variations. The putamen and globus pallidus show the highest precision, followed by the caudate nucleus, red nucleus, and substantia nigra.

  • Fig 7.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 7.

    Linear regression results comparing susceptibility values versus age by using 135 datasets collected in this study. Among the 5 ROIs, the putamen, globus pallidus, and red nucleus present correlation coefficients of 0.40, 0.35, and 0.47, respectively (P < .001). The caudate nucleus shows no age association (P > .5), and the substantia nigra exhibits a marginal association that does not reach statistical significance after Bonferroni correction (P = .02). The vertical error bars shown on the left stand for the cross-site variability values of iterative QSM found for these regions.

Tables

  • Figures
  • Within-site and cross-site imprecisions averaged from 9 subjects

    ROIMethodWithin-Site Imprecision (ppm)Cross-Site Imprecision (ppm)
    Caudate nucleusIterative QSM0.0054 (10.0%)0.0059 (11.0%)
    Deterministic QSM0.0087 (17.9%)0.0107 (21.9%)
    PutamenIterative QSM0.0037 (9.3%)0.0038 (9.5%)
    Deterministic QSM0.0048 (8.3%)0.0061 (10.6%)
    Globus pallidusIterative QSM0.0044 (3.4%)0.0054 (4.1%)
    Deterministic QSM0.0056 (3.4%)0.0068 (4.1%)
    Red nucleusIterative QSM0.0113 (18.4%)0.0115 (18.7%)
    Deterministic QSM0.0091 (9.3%)0.0103 (10.6%)
    Substantia nigraIterative QSM0.0099 (15.2%)0.0121 (18.6%)
    Deterministic QSM0.0081 (8.2%)0.0108 (11.1%)
PreviousNext
Back to top

In this issue

American Journal of Neuroradiology: 36 (3)
American Journal of Neuroradiology
Vol. 36, Issue 3
1 Mar 2015
  • Table of Contents
  • Index by author
  • Complete Issue (PDF)
Advertisement
Print
Download PDF
Email Article

Thank you for your interest in spreading the word on American Journal of Neuroradiology.

NOTE: We only request your email address so that the person you are recommending the page to knows that you wanted them to see it, and that it is not junk mail. We do not capture any email address.

Enter multiple addresses on separate lines or separate them with commas.
Quantitative Susceptibility Mapping of Human Brain at 3T: A Multisite Reproducibility Study
(Your Name) has sent you a message from American Journal of Neuroradiology
(Your Name) thought you would like to see the American Journal of Neuroradiology web site.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Cite this article
P.-Y. Lin, T.-C. Chao, M.-L. Wu
Quantitative Susceptibility Mapping of Human Brain at 3T: A Multisite Reproducibility Study
American Journal of Neuroradiology Mar 2015, 36 (3) 467-474; DOI: 10.3174/ajnr.A4137

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
0 Responses
Respond to this article
Share
Bookmark this article
Quantitative Susceptibility Mapping of Human Brain at 3T: A Multisite Reproducibility Study
P.-Y. Lin, T.-C. Chao, M.-L. Wu
American Journal of Neuroradiology Mar 2015, 36 (3) 467-474; DOI: 10.3174/ajnr.A4137
del.icio.us logo Twitter logo Facebook logo Mendeley logo
  • Tweet Widget
  • Facebook Like
  • Google Plus One
Purchase

Jump to section

  • Article
    • Abstract
    • ABBREVIATIONS:
    • Materials and methods
    • Results
    • Discussion
    • Conclusions
    • Acknowledgments
    • Footnotes
    • REFERENCES
  • Figures & Data
  • Info & Metrics
  • Responses
  • References
  • PDF

Related Articles

  • No related articles found.
  • PubMed
  • Google Scholar

Cited By...

  • Iron Deposition and Distribution Across the Hippocampus Is Associated with Pattern Separation and Pattern Completion in Older Adults at Risk for Alzheimer's Disease
  • Validation of Data Acquisition and Phase Estimation for Quantitative Susceptibility Mapping with a Rotating-Tube Phantom
  • Multi-centre, multi-vendor reproducibility of 7T QSM and R2* in the human brain: results from the UK7T study
  • In Vivo MRI Mapping of Brain Iron Deposition across the Adult Lifespan
  • Crossref (53)
  • Google Scholar

This article has been cited by the following articles in journals that are participating in Crossref Cited-by Linking.

  • Overview of quantitative susceptibility mapping
    Andreas Deistung, Ferdinand Schweser, Jürgen R. Reichenbach
    NMR in Biomedicine 2017 30 4
  • In VivoMRI Mapping of Brain Iron Deposition across the Adult Lifespan
    Julio Acosta-Cabronero, Matthew J. Betts, Arturo Cardenas-Blanco, Shan Yang, Peter J. Nestor
    The Journal of Neuroscience 2016 36 2
  • Clinical quantitative susceptibility mapping (QSM): Biometal imaging and its emerging roles in patient care
    Yi Wang, Pascal Spincemaille, Zhe Liu, Alexey Dimov, Kofi Deh, Jianqi Li, Yan Zhang, Yihao Yao, Kelly M. Gillen, Alan H. Wilman, Ajay Gupta, Apostolos John Tsiouris, Ilhami Kovanlikaya, Gloria Chia‐Yi Chiang, Jonathan W. Weinsaft, Lawrence Tanenbaum, Weiwei Chen, Wenzhen Zhu, Shixin Chang, Min Lou, Brian H. Kopell, Michael G. Kaplitt, David Devos, Toshinori Hirai, Xuemei Huang, Yukunori Korogi, Alexander Shtilbans, Geon‐Ho Jahng, Daniel Pelletier, Susan A. Gauthier, David Pitt, Ashley I. Bush, Gary M. Brittenham, Martin R. Prince
    Journal of Magnetic Resonance Imaging 2017 46 4
  • The clinical utility of QSM: disease diagnosis, medical management, and surgical planning
    Sarah Eskreis‐Winkler, Yan Zhang, Jingwei Zhang, Zhe Liu, Alexey Dimov, Ajay Gupta, Yi Wang
    NMR in Biomedicine 2017 30 4
  • A robust multi-scale approach to quantitative susceptibility mapping
    Julio Acosta-Cabronero, Carlos Milovic, Hendrik Mattern, Cristian Tejos, Oliver Speck, Martina F. Callaghan
    NeuroImage 2018 183
  • Quantitative susceptibility mapping (QSM) and R2* in the human brain at 3 T
    Xiang Feng, Andreas Deistung, Jürgen R. Reichenbach
    Zeitschrift für Medizinische Physik 2018 28 1
  • The effect of low resolution and coverage on the accuracy of susceptibility mapping
    Anita Karsa, Shonit Punwani, Karin Shmueli
    Magnetic Resonance in Medicine 2019 81 3
  • Quantitative Susceptibility Mapping at 3 T and 1.5 T
    Takuya Hinoda, Yasutaka Fushimi, Tomohisa Okada, Koji Fujimoto, Chunlei Liu, Akira Yamamoto, Tsutomu Okada, Aki Kido, Kaori Togashi
    Investigative Radiology 2015 50 8
  • Quantitative susceptibility mapping (QSM) minimizes interference from cellular pathology in R2* estimation of liver iron concentration
    Jianqi Li, Huimin Lin, Tian Liu, Zhuwei Zhang, Martin R. Prince, Kelly Gillen, Xu Yan, Qi Song, Ting Hua, Xiance Zhao, Miao Zhang, Yu Zhao, Gaiying Li, Guangyu Tang, Guang Yang, Gary M. Brittenham, Yi Wang
    Journal of Magnetic Resonance Imaging 2018 48 4
  • Multi-site harmonization of 7 tesla MRI neuroimaging protocols
    William T. Clarke, Olivier Mougin, Ian D. Driver, Catarina Rua, Andrew T. Morgan, Michael Asghar, Stuart Clare, Susan Francis, Richard G. Wise, Christopher T. Rodgers, Adrian Carpenter, Keith Muir, Richard Bowtell
    NeuroImage 2020 206

More in this TOC Section

  • Progression of Microstructural Damage in Spinocerebellar Ataxia Type 2: A Longitudinal DTI Study
  • Usefulness of Quantitative Susceptibility Mapping for the Diagnosis of Parkinson Disease
  • Evaluating the Effects of White Matter Multiple Sclerosis Lesions on the Volume Estimation of 6 Brain Tissue Segmentation Methods
Show more Brain

Similar Articles

Advertisement

Indexed Content

  • Current Issue
  • Accepted Manuscripts
  • Article Preview
  • Past Issues
  • Editorials
  • Editors Choice
  • Fellow Journal Club
  • Letters to the Editor

Cases

  • Case Collection
  • Archive - Case of the Week
  • Archive - Case of the Month
  • Archive - Classic Case

Special Collections

  • Special Collections

Resources

  • News and Updates
  • Turn around Times
  • Submit a Manuscript
  • Author Policies
  • Manuscript Submission Guidelines
  • Evidence-Based Medicine Level Guide
  • Publishing Checklists
  • Graphical Abstract Preparation
  • Imaging Protocol Submission
  • Submit a Case
  • Become a Reviewer/Academy of Reviewers
  • Get Peer Review Credit from Publons

Multimedia

  • AJNR Podcast
  • AJNR SCANtastic
  • Video Articles

About Us

  • About AJNR
  • Editorial Board
  • Not an AJNR Subscriber? Join Now
  • Alerts
  • Feedback
  • Advertise with us
  • Librarian Resources
  • Permissions
  • Terms and Conditions

American Society of Neuroradiology

  • Not an ASNR Member? Join Now

© 2025 by the American Society of Neuroradiology All rights, including for text and data mining, AI training, and similar technologies, are reserved.
Print ISSN: 0195-6108 Online ISSN: 1936-959X

Powered by HighWire