Skip to main content
Advertisement

Main menu

  • Home
  • Content
    • Current Issue
    • Accepted Manuscripts
    • Article Preview
    • Past Issue Archive
    • AJNR Case Collection
    • Case of the Week Archive
    • Classic Case Archive
    • Case of the Month Archive
  • Special Collections
    • Spinal CSF Leak Articles (Jan 2020-June 2024)
    • 2024 AJNR Journal Awards
    • Most Impactful AJNR Articles
  • Multimedia
    • AJNR Podcast
    • AJNR Scantastics
    • Video Articles
  • For Authors
    • Submit a Manuscript
    • Author Policies
    • Fast publishing of Accepted Manuscripts
    • Graphical Abstract Preparation
    • Manuscript Submission Guidelines
    • Imaging Protocol Submission
    • Submit a Case for the Case Collection
  • About Us
    • About AJNR
    • Editorial Board
  • More
    • Become a Reviewer/Academy of Reviewers
    • Subscribers
    • Permissions
    • Alerts
    • Feedback
    • Advertisers
    • ASNR Home
  • Other Publications
    • ajnr

User menu

  • Alerts
  • Log in

Search

  • Advanced search
American Journal of Neuroradiology
American Journal of Neuroradiology

American Journal of Neuroradiology

ASHNR American Society of Functional Neuroradiology ASHNR American Society of Pediatric Neuroradiology ASSR
  • Alerts
  • Log in

Advanced Search

  • Home
  • Content
    • Current Issue
    • Accepted Manuscripts
    • Article Preview
    • Past Issue Archive
    • AJNR Case Collection
    • Case of the Week Archive
    • Classic Case Archive
    • Case of the Month Archive
  • Special Collections
    • Spinal CSF Leak Articles (Jan 2020-June 2024)
    • 2024 AJNR Journal Awards
    • Most Impactful AJNR Articles
  • Multimedia
    • AJNR Podcast
    • AJNR Scantastics
    • Video Articles
  • For Authors
    • Submit a Manuscript
    • Author Policies
    • Fast publishing of Accepted Manuscripts
    • Graphical Abstract Preparation
    • Manuscript Submission Guidelines
    • Imaging Protocol Submission
    • Submit a Case for the Case Collection
  • About Us
    • About AJNR
    • Editorial Board
  • More
    • Become a Reviewer/Academy of Reviewers
    • Subscribers
    • Permissions
    • Alerts
    • Feedback
    • Advertisers
    • ASNR Home
  • Follow AJNR on Twitter
  • Visit AJNR on Facebook
  • Follow AJNR on Instagram
  • Join AJNR on LinkedIn
  • RSS Feeds

Welcome to the new AJNR, Updated Hall of Fame, and more. Read the full announcements.


AJNR is seeking candidates for the position of Associate Section Editor, AJNR Case Collection. Read the full announcement.

 

Getting new auth cookie, if you see this message a lot, tell someone!
Research ArticlePEDIATRICS

Quantitative Short Echo Time 1H-MR Spectroscopy of Untreated Pediatric Brain Tumors: Preoperative Diagnosis and Characterization

A. Panigrahy, M.D. Krieger, I. Gonzalez-Gomez, X. Liu, J.G. McComb, J.L. Finlay, M.D. Nelson, F.H. Gilles and S. Blüml
American Journal of Neuroradiology March 2006, 27 (3) 560-572;
A. Panigrahy
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
M.D. Krieger
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
I. Gonzalez-Gomez
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
X. Liu
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
J.G. McComb
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
J.L. Finlay
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
M.D. Nelson Jr.
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
F.H. Gilles
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
S. Blüml
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • Article
  • Figures & Data
  • Info & Metrics
  • Responses
  • References
  • PDF
Loading

Article Figures & Data

Figures

  • Tables
  • Fig 1.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 1.

    1H-MR spectroscopy of medulloblastoma. 1H spectra of a solid-appearing medulloblastoma (A) and of a medulloblastoma with necrotic/cystic areas (B) and corresponding T2-weighted transverse fast spin-echo MR image [repetition time (TR)/echo time (TE), 3500/85 ms; 256 × 192 matrix; 2 signals acquired; echo-train length of 16; acquisition time of 2 minutes 48 seconds] indicating the region of interest. Absolute quantitation included a correction for the different fraction of cystic tissue (6% versus 48%), and spectra are scaled to allow direct comparison of peak areas. A singlet at 3.78 ppm consistent with guanidinoacetate (Gau) is observed, and taurine (Tau) is detected as a complex signal intensity at ≈3.4 ppm. Note the different levels of Tau, creatine (Cr), and glutamate/glutamine (Glu/Gln) signal intensity in the spectra. Spectra also exhibit broad lipid and macromolecule resonances at 0.9 and 1.3 ppm. One peak of the lactate (Lac) doublet at 1.33 ppm is detected as a shoulder of the broad LipMM13 resonance. N-acetylaspartate (NAA) is depleted, and total choline (tCho) is prominent in all spectra of medulloblastoma. The insert in spectrum A shows the spectrum of Tau scaled to the size of the fitted Tau components. Shown are the unfiltered raw data (thin line) and the LCModel fit to the data (thick line).

  • Fig 2.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 2.

    1H MR spectroscopy of pilocytic astrocytoma. Short echo time (TE) spectra of a supratentorial (A) and infratentorial (B) pilocytic astrocytoma and corresponding MR images indicating the regions of interest are shown. Pilocytic astrocytoma spectra are noisy because of the low cellularity of the lesions. Absolute quantitation revealed low creatine (Cr) concentrations. High lactate (Lac) and prominent total choline (tCho) and N-acetylaspartate (NAA) relative to creatine were noted.

  • Fig 3.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 3.

    Choroid plexus papilloma and choroid plexus carcinoma. Short echo time (TE) MR spectra of a supratentorial (A) and a infratentorial (B) choroid plexus papilloma and of a choroid plexus carcinoma (C) with corresponding MR images indicating the regions of interest. Choroid plexus papilloma shows a prominent myo-inositol peak, whereas creatine (Cr) is hardly detectable. In contrast, more malignant choroid plexus carcinoma shows a prominent choline peak, whereas myo-inositol is not elevated. The insert in spectrum A displays a long TE spectrum obtained from the same region of interest. The long TE spectrum is used to rule out glycine contributing to the mI peak.

  • Fig 4.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 4.

    Low-grade astrocytoma and anaplastic astrocytoma. Short echo time (TE) MR spectra of 2 anaplastic astrocytomas (A, -B) and of low-grade astrocytoma (C) with corresponding MR images indicating the regions of interest are shown. The 3 spectra are scaled according to measured concentrations to allow direct comparison. Astrocytomas appear to be quite heterogeneous. Note the striking difference in total choline (tCho) in spectra A and B, tumors of the same diagnostic name. The prominent scyllo-inositol (sI) observed in spectrum C is not representative for all astrocytoma.

  • Fig 5.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 5.

    Low-grade ependymoma and anaplastic ependymoma. Short echo time (TE) MR spectra of a low-grade ependymoma (A) and of an anaplastic ependymoma (B) with corresponding MR images indicating the regions of interest. The 2 spectra are scaled according to measured concentration to allow direct comparison. A feature of ependymoma is very low N-acetylaspartate (NAA) signal intensity. In particular, no trace of NAA was found in any of the anaplastic ependymoma. Note that glutamate + glutamine (Glx) relative to creatine (Cr) is more prominent in anaplastic ependymoma.

  • Fig 6.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 6.

    Pineal germinoma. Short echo time (TE) MR spectra of a pineal germinoma and MR imaging indicating the region of interest. Taurine (Tau) and guanidinoacetate (Gau) are, as in medulloblastoma, consistently observed in all pineal germinomas.

  • Fig 7.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig 7.

    Differentiation of common pediatric brain tumors by quantitative 1H-MR spectroscopy. Shown are measured concentrations and concentration ratios of tumors obtained from individual spectra. Labels 1, 2, and 3 in B, C, E, and F indicate data points obtained from individual spectra of the 3 cases presented in more detail in the Results section.

Tables

  • Figures
    • View popup
    Table 1:

    Patient demographics

    WHO GradeSubjectsS/INo. of SpectraSex (F/M)Age (mean ± SD)
    Study subjects6027/337825/357.22 ± 5.18
        PNET (medulloblastoma)IV140/14166/86.2 ± 3.6
        Anaplastic astrocytomaIII55/052/312.4 ± 6.5
        Low-grade astrocytomaII32/142/15.2 ± 1.6
        Pilocytic astrocytomaI176/11218/96.2 ± 4.9
        Anaplastic ependymomaIII43/152/25.6 ± 3.3
        EpendymomaII50/583/24.7 ± 3.4
        Choroid plexus papillomaI32/160/39.2 ± 6.5
        Choroid plexus carcinomaIV33/041/21.1 ± 1.4
        Germinoma (pineal)—*66/091/514.4 ± 2.4
    • Note:—S indicates supratentorial; I, infratentorial; PNET, primitive neuroectodermal tumor.

    • * There is no WHO grade for germinoma. Germinomas sometimes come mixed with other primitive germ cell components such as endodermal sinus tumor, choriocarcinoma, immature teratoma, and mature teratoma. All germinoma cases included in this study were pure germinomas and responded well to radiation therapy.

    • View popup
    Table 2:

    Absolute concentrations and concentration ratios of untreated pediatric brain tumors

    MedulloblastomaAnaplastic Astrocytoma/AstrocytomaPilocytic AstrocytomaAnaplastic Ependymoma/EpendymomaChoroid Plexus PapillomaChoroid Plexus CarcinomaPineal GerminomaAll Tumors
    Subjects14817933660
    Absolute concentrations (mmol/kg tissue)
        [NAA]0.9 ± 0.82.3 ± 1.51.9 ± 0.80.2 ± 0.4****2.4 ± 1.30.2 ± 0.1*****1.3 ± 1.11.3 ± 1.1
        [Cr]4.7 ± 1.76.2 ± 2.41.0 ± 0.8*****5.3 ± 3.11.3 ± 0.7*1.2 ± 0.7*3.1 ± 0.93.5 ± 2.6
        [tCho]5.1 ± 1.5***3.9 ± 3.12.2 ± 1.1*3.2 ± 1.51.8 ± 0.3***5.1 ± 2.12.2 ± 0.5*3.4 ± 2.0
        [mI]7.4 ± 4.012.3 ± 5.33.8 ± 2.1*****13.1 ± 5.720.4 ± 3.7*4.1 ± 2.05.2 ± 1.1*8.2 ± 5.8
        [Gln]6.3 ± 3.59.51 ± 4.16.4 ± 3.28.4 ± 3.92.6 ± 0.6****2.6 ± 1.54.4 ± 2.66.5 ± 3.7
        [Glu]7.5 ± 4.04.8 ± 2.93.3 ± 1.8*2.9 ± 3.24.2 ± 2.42.7 ± 1.68.7 ± 2.75.0 ± 3.5
        [Glx]†13.8 ± 5.214.4 ± 4.59.7 ± 3.511.3 ± 4.46.8 ± 2.05.4 ± 0.9****13.1 ± 3.111.5 ± 4.7
        [Tau]5.8 ± 2.3****1.7 ± 1.10.4 ± 0.6*****1.5 ± 1.10.8 ± 0.92.5 ± 0.63.0 ± 1.32.3 ± 2.5
        [Glc]1.0 ± 0.82.2 ± 1.12.5 ± 1.80.8 ± 0.71.6 ± 0.83.4 ± 2.60.9 ± 1.01.7 ± 1.5
        [Lac]3.6 ± 1.62.8 ± 3.94.3 ± 2.22.1 ± 2.10.6 ± 0.5**1.5 ± 1.40.9 ± 1.63.0 ± 2.5
        [sI]0.2 ± 0.20.5 ± 0.50.2 ± 0.30.3 ± 0.30.9 ± 0.20.0 ± 0.1***0.3 ± 0.30.3 ± 0.3
        [Ala]2.7 ± 1.2*0.9 ± 0.91.4 ± 0.71.7 ± 1.01.0 ± 0.70.9 ± 1.02.0 ± 0.91.7 ± 1.1
        [Gua]3.7 ± 1.1*1.5 ± 0.5****2.6 ± 1.02.4 ± 1.03.0 ± 1.03.1 ± 0.43.7 ± 1.12.8 ± 1.2
    LipMM09‡16.7 ± 9.77.0 ± 2.6**11.4 ± 5.214.5 ± 6.84.4 ± 1.6**12.5 ± 7.512.0 ± 5.412.3 ± 7.2
    LipMM13‡64.3 ± 73.215.9 ± 13.4*21.8 ± 16.149.6 ± 31.48.3 ± 2.4****61.8 ± 73.963.4 ± 53.940.6 ± 47.9
        [NAA]/[tCho]0.2 ± 0.2***0.9 ± 0.90.9 ± 0.4**0.1 ± 0.2***1.3 ± 0.50.1 ± 0.0*****0.6 ± 0.50.6 ± 0.6
        [Crl]/[tCho]1.0 ± 0.42.1 ± 1.20.5 ± 0.3*****1.8 ± 0.80.7 ± 0.30.3 ± 0.2***1.5 ± 0.51.1 ± 0.8
        [mI]/[tCho]1.5 ± 0.9**4.0 ± 2.01.8 ± 0.7*4.8 ± 2.411.9 ± 3.70.9 ± 0.6*2.5 ± 1.13.0 ± 2.8
        [Gln]/[tCho]1.2 ± 0.6****2.8 ± 1.03.2 ± 1.72.9 ± 1.61.5 ± 0.50.7 ± 0.62.0 ± 1.22.3 ± 1.5
        [Glu]/[tcho]1.5 ± 0.81.8 ± 1.71.7 ± 0.91.3 ± 1.52.3 ± 1.00.6 ± 0.3*4.0 ± 1.1*1.8 ± 1.4
        [Glx]/[tCho]2.8 ± 0.9***4.7 ± 2.24.8 ± 1.74.2 ± 2.63.8 ± 0.51.2 ± 0.7*6.0 ± 0.8**4.1 ± 2.0
        [Tau]/[tCho]1.2 ± 0.5**0.3 ± 0.30.2 ± 0.4*0.5 ± 0.30.5 ± 0.60.6 ± 0.31.4 ± 0.60.6 ± 0.6
        [NAA]/[Cr]0.2 ± 0.2**0.4 ± 0.31.8 ± 1.2**0.1 ± 0.1****1.8 ± 0.40.1 ± 0.1***0.4 ± 0.3*0.7 ± 1.0
        [mI]/[Cr]1.7 ± 0.9*2.0 ± 0.5*3.6 ± 1.92.8 ± 1.416.6 ± 6.67.0 ± 7.31.8 ± 0.5*3.5 ± 4.0
        [Gln]/[Cr]1.3 ± 0.7***1.8 ± 1.05.5 ± 2.5***1.7 ±0.72.0 ± 1.24.1 ± 4.01.3 ± 1.02.7 ± 2.4
        [Glu]/[Cr]1.9 ± 1.50.8 ± 0.5***3.5 ± 2.50.8 ± 1.0*3.1 ± 0.42.7 ± 1.02.9 ± 0.92.2 ± 1.8
        [Glx]/[Cr]3.3 ± 1.62.6 ± 1.1*9.1 ± 4.6**2.5 ± 1.4*5.1 ± 1.17.0 ± 4.84.2 ± 1.14.9 ± 3.8
        [Tau]/[Cr]1.3 ± 0.4*0.2 ± 0.3*0.3 ± 0.4*0.3 ± 0.30.5 ± 0.93.6 ± 2.81.2 ± 0.80.8 ± 1.1
        [Gau]/[Cr]0.9 ± 0.40.3 ± 0.1****2.7 ± 2.30.6 ± 0.3*2.4 ± 0.95.1 ± 4.31.4 ± 0.51.6 ± 1.9
        [Glc]/[Cr]0.2 ± 0.2*0.4 ± 0.22.4 ± 1.50.2 ± 0.2*1.5 ± 1.36.5 ± 7.90.3 ± 0.31.2 ± 2.3
    • Note:—

    • * P < .01,

    • ** P < .001,

    • *** P < .0001,

    • **** P < .00001,

    • ***** P< .000001 versus All Other tumors

    • † [Glx] = [Glu] + [Gln].

    • ‡ Absolute intensity (arbitrary units).

    • View popup
    Table 3:

    Differentiation between different tumor types

    Ana. Astrocytoma/AstrocytomaPilocytic AstrocytomaAna. Ependymoma/EpendymomaChoroid PlexusPapillomaChoroid PlexusCarciomaPineal Germinoma
    Medulloblastoma↑[Tau]/[Cr]*****↑[Tau]****↑[Tau]/[Cr]****↑[tCho]****↑[Glx]***↑[tCho]****
    ↑[Tau]****↓[NAA]/[tCho]****↑[Tau]****[↑[Lac]**↑[Cr]**↓[Glx]/[tCho]****
    ↑[Gua]****↑[Tau]/[Cr]****↑[Tau]/[tCho]**↑[Tau]**↑[Tau]**↑[Tau]*
    Ana. Astro./Astrocytoma↑[Gln]/[Cr]***↑[NAA]*↑[Cr]**↑[Cr]**↓[Glu]/[Cr]*
    ↑[Cr]/[tCho]***↓[Gua]/[Cr]*↓[Glu]/[Cr]**↑[Glx]**↓[Gua]/[Cr]*
    ↑[Cr]**↓LipMM09*↓[Gln]*↓[Gua]*↓[Gua]*
    Pilocytic Astrocytoma[NAA]/[tCho]*****↑[Lac]***↑[NAA]/[tCho]*****↑[Gln]/[Cr]***
    ↑[NAA]*****↑[Gln]**↑[NAA]*****↑[Glc]/[Cr]***
    ↑[Gln]/[Cr]***↑LipMM09**↑[Glx]**↑[tCho]/[Cr]**
    Ana. Epend./Ependymoma↓[Glu]/[Cr]**↑[Cr]/[tCho]**↑[Glu//[tCho]*
    ↑[Gln]*↑[mI]*↓[Glu]/[Cr]*
    ↑LipMM09*↑[Glx]*↑[mI]*
    Choroid↑[mI]*↓[Glx]/[tCho]*
    Plexus↑[tCho]*↓[Glx]*
    Papilloma↑[NAA]/[Cr]*↑[NAA]/[Cr]*
    Choroid Plexus Carcinoma↓[Glu]/[tCho]**
    ↓[Glx]**
    ↓[Cr]/[tCho]*
    • * P < .01,

    • ** P < .001,

    • *** P < .0001,

    • **** P < .00001,

    • ***** P < .000001.

PreviousNext
Back to top

In this issue

American Journal of Neuroradiology: 27 (3)
American Journal of Neuroradiology
Vol. 27, Issue 3
March, 2006
  • Table of Contents
  • Index by author
Advertisement
Print
Download PDF
Email Article

Thank you for your interest in spreading the word on American Journal of Neuroradiology.

NOTE: We only request your email address so that the person you are recommending the page to knows that you wanted them to see it, and that it is not junk mail. We do not capture any email address.

Enter multiple addresses on separate lines or separate them with commas.
Quantitative Short Echo Time 1H-MR Spectroscopy of Untreated Pediatric Brain Tumors: Preoperative Diagnosis and Characterization
(Your Name) has sent you a message from American Journal of Neuroradiology
(Your Name) thought you would like to see the American Journal of Neuroradiology web site.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Cite this article
A. Panigrahy, M.D. Krieger, I. Gonzalez-Gomez, X. Liu, J.G. McComb, J.L. Finlay, M.D. Nelson, F.H. Gilles, S. Blüml
Quantitative Short Echo Time 1H-MR Spectroscopy of Untreated Pediatric Brain Tumors: Preoperative Diagnosis and Characterization
American Journal of Neuroradiology Mar 2006, 27 (3) 560-572;

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
0 Responses
Respond to this article
Share
Bookmark this article
Quantitative Short Echo Time 1H-MR Spectroscopy of Untreated Pediatric Brain Tumors: Preoperative Diagnosis and Characterization
A. Panigrahy, M.D. Krieger, I. Gonzalez-Gomez, X. Liu, J.G. McComb, J.L. Finlay, M.D. Nelson, F.H. Gilles, S. Blüml
American Journal of Neuroradiology Mar 2006, 27 (3) 560-572;
del.icio.us logo Twitter logo Facebook logo Mendeley logo
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Jump to section

  • Article
    • Abstract
    • Materials and Methods
    • Results
    • Discussion
    • Conclusion
    • Acknowledgments
    • Footnotes
    • References
  • Figures & Data
  • Info & Metrics
  • Responses
  • References
  • PDF

Related Articles

  • No related articles found.
  • PubMed
  • Google Scholar

Cited By...

  • Pediatric Atypical Teratoid/Rhabdoid Tumors of the Brain: Identification of Metabolic Subgroups Using In Vivo 1H-MR Spectroscopy
  • What is MR spectroscopy?
  • Multimodality Brain Tumor Imaging: MR Imaging, PET, and PET/MR Imaging
  • Comparison of Perfusion, Diffusion, and MR Spectroscopy between Low-Grade Enhancing Pilocytic Astrocytomas and High-Grade Astrocytomas
  • Crossref
  • Google Scholar

This article has not yet been cited by articles in journals that are participating in Crossref Cited-by Linking.

More in this TOC Section

  • Comparison of Image Quality and Radiation Dose in Pediatric Temporal Bone CT Using Photon-Counting Detector CT and Energy-Integrating Detector CT
  • SyMRI & MR Fingerprinting in Brainstem Myelination
  • Pons&Vermis Localization on Fetal MRI Using U-Net
Show more Pediatrics

Similar Articles

Advertisement

Indexed Content

  • Current Issue
  • Accepted Manuscripts
  • Article Preview
  • Past Issues
  • Editorials
  • Editors Choice
  • Fellow Journal Club
  • Letters to the Editor

Cases

  • Case Collection
  • Archive - Case of the Week
  • Archive - Case of the Month
  • Archive - Classic Case

Special Collections

  • Special Collections

Resources

  • News and Updates
  • Turn around Times
  • Submit a Manuscript
  • Author Policies
  • Manuscript Submission Guidelines
  • Evidence-Based Medicine Level Guide
  • Publishing Checklists
  • Graphical Abstract Preparation
  • Imaging Protocol Submission
  • Submit a Case
  • Become a Reviewer/Academy of Reviewers
  • Get Peer Review Credit from Publons

Multimedia

  • AJNR Podcast
  • AJNR SCANtastic
  • Video Articles

About Us

  • About AJNR
  • Editorial Board
  • Not an AJNR Subscriber? Join Now
  • Alerts
  • Feedback
  • Advertise with us
  • Librarian Resources
  • Permissions
  • Terms and Conditions

American Society of Neuroradiology

  • Not an ASNR Member? Join Now

© 2025 by the American Society of Neuroradiology All rights, including for text and data mining, AI training, and similar technologies, are reserved.
Print ISSN: 0195-6108 Online ISSN: 1936-959X

Powered by HighWire