Impact of Methodologic Choice for Automatic Detection of Different Aspects of Brain Atrophy by Using Temporal Lobe Epilepsy as a Model

References

1. 1.↵
   1. Mechelli A,
   2. Price CJ,
   3. Friston KJ,
   4. et al

   . Voxel-based morphometry of the human brain: methods and applications. Curr Med Imaging Rev 2005; 1: 105–13

   CrossRefWeb of Science
2. 2.↵
   1. Wright IC,
   2. McGuire PK,
   3. Poline JB,
   4. et al

   . A voxel-based method for the statistical analysis of gray and white matter density applied to schizophrenia. Neuroimage 1995; 2: 244–52

   CrossRefPubMedWeb of Science
3. 3.↵
   1. Ashburner J,
   2. Hutton C,
   3. Frackowiak R,
   4. et al

   . Identifying global anatomical differences: deformation-based morphometry. Neuroimage 1998; 6: 348–57
4. 4.↵
   1. Davatzikos C,
   2. Vaillant M,
   3. Resnick SM,
   4. et al

   . A computerised approach for morphological analysis of the corpus callosum. J Comput Tomogr 1996; 20: 88–97

   CrossRef
5. 5.↵
   1. Fischl B,
   2. Dale AM

   . Measuring the thickness of the human cerebral cortex from magnetic resonance images. Proc Natl Acad Sci U S A 2000; 97: 11050–55

   Abstract/FREE Full Text
6. 6.↵
   1. Lerch JP,
   2. Evans AC

   . Cortical thickness analysis examined through power analysis and a population simulation. Neuroimage 2005; 24: 163–73

   CrossRefPubMedWeb of Science
7. 7.↵
   1. Bonilha L,
   2. Edwards JC,
   3. Kinsman SL,
   4. et al

   . Extrahippocampal gray matter loss and hippocampal deafferentation in patients with temporal lobe epilepsy. Epilepsia 2010; 51: 519–28

   CrossRefPubMed
8. 8.↵
   1. Eriksson SH,
   2. Thom M,
   3. Symms MR,
   4. et al

   . Cortical neuronal loss and hippocampal sclerosis are not detected by voxel-based morphometry in individual epilepsy surgery patients. Hum Brain Mapp 2009; 30: 3351–60

   CrossRefPubMed
9. 9.↵
   1. Keller SS,
   2. Roberts N

   . Voxel-based morphometry of temporal lobe epilepsy: an introduction and review of the literature. Epilepsia 2008; 49: 741–57

   CrossRefPubMedWeb of Science
10. 10.↵
    1. Labate A,
    2. Cerasa A,
    3. Aguglia U,
    4. et al

    . Voxel-based morphometry of sporadic epileptic patients with mesiotemporal sclerosis. Epilepsia 2010; 51: 506–10

    CrossRefPubMed
11. 11.↵
    1. Riederer F,
    2. Lanzenberger R,
    3. Kaya M,
    4. et al

    . Network atrophy in temporal lobe epilepsy: a voxel-based morphometry study. Neurology 2008; 71: 419–25

    Abstract/FREE Full Text
12. 12.↵
    1. Good CD,
    2. Johnsrude IS,
    3. Ashburner J,
    4. et al

    . A voxel-based morphometric study of ageing in 465 normal adult human brains. Neuroimage 2001a; 14: 21–36

    CrossRefPubMedWeb of Science
13. 13.↵
    1. Apostolova LG,
    2. Thompson PM

    . Brain mapping as a tool to study neurodegeneration. Neurotherapeutics 2007; 4: 387–400

    CrossRefPubMed
14. 14.↵
    1. Studholme C,
    2. Cardenas V,
    3. Blumenfeld R,
    4. et al

    . Deformation tensor morphometry of semantic dementia with quantitative validation. Neuroimage 2004; 21: 1387–98

    CrossRefPubMedWeb of Science
15. 15.↵
    1. Bernhardt BC,
    2. Worsley KJ,
    3. Besson P,
    4. et al

    . Mapping limbic network organization in temporal lobe epilepsy using morphometric correlations: insights on the relation between mesiotemporal connectivity and cortical atrophy. Neuroimage 2008; 42: 515–24

    CrossRefPubMedWeb of Science
16. 16.↵
    1. Mueller SG,
    2. Laxer KD,
    3. Barakos J,
    4. et al

    . Widespread neocortical abnormalities in temporal lobe epilepsy with and without mesial sclerosis. Neuroimage 2009; 46: 353–59

    CrossRefPubMedWeb of Science
17. 17.↵
    1. Bernasconi N,
    2. Bernasconi A,
    3. Caramanos Z,
    4. et al

    . Entorhinal cortex atrophy in epilepsy patients exhibiting normal hippocampal volumes. Neurology 2001; 56: 1335–39

    Abstract/FREE Full Text
18. 18.↵
    1. Mueller SG,
    2. Laxer KD,
    3. Schuff N,
    4. et al

    . Voxel-based T2 relaxation rate measurements in temporal lobe epilepsy (TLE) with and without mesial temporal sclerosis. Epilepsia 2007; 48: 220–28

    CrossRefPubMed
19. 19.↵
    1. Mueller SG,
    2. Laxer KD,
    3. Cashdollar N,
    4. et al

    . Voxel-based optimized morphometry (VBM) of gray and white matter in temporal lobe epilepsy (TLE) with and without mesial temporal sclerosis. Epilepsia 2006; 47: 900–07

    CrossRefPubMedWeb of Science
20. 20.↵
    1. Mueller SG,
    2. Laxer KD,
    3. Barakos J,
    4. et al

    . Subfield atrophy pattern in temporal lobe epilepsy with and without mesial sclerosis detected by high-resolution MRI at 4 Tesla: preliminary results. Epilepsia 2009; 50: 1474–84

    CrossRefPubMed
21. 21.↵
    1. Good CD,
    2. Johnsrude IS,
    3. Ashburner J,
    4. et al

    . Cerebral asymmetry and the effects of sex and handedness on brain structure: a voxel based morphometric analysis of 465 normal adult human brains. Neuroimage 2001b; 14: 685–700

    CrossRefPubMedWeb of Science
22. 22.↵
    1. Van Leemput K,
    2. Maes F,
    3. Vandermeulen D,
    4. et al

    . Automated model based bias field correction of MR images of the brain. IEEE Trans Med Imag 1999; 18: 885–96

    CrossRefPubMedWeb of Science
23. 23.↵
    1. Ashburner J,
    2. Friston KJ

    . Voxel-based morphometry—the methods. Neuroimage 2000; 11: 805–21

    CrossRefPubMedWeb of Science
24. 24.↵
    1. Christensen GE,
    2. Rabbitt RD,
    3. Miller MI

    . Deformable templates using large deformation kinematics. IEEE Trans Image Process 1996; 5: 1435–47

    CrossRefPubMedWeb of Science
25. 25.↵
    1. Lorenzen P,
    2. Prastawa M,
    3. Davis B,
    4. et al

    . Multi-modal image set registration and atlas formation. Med Image Anal 2006; 10: 440–51

    CrossRefPubMed
26. 26.↵
    1. Joshi S,
    2. Davis B,
    3. Jomier M,
    4. et al

    . Unbiased diffeomorphic atlas construction for computational anatomy. Neuroimage 2004; 23: 151–60

    CrossRef
27. 27.↵
    1. Dale AM,
    2. Fischl B,
    3. Sereno MI

    . Cortical surface-based analysis I: segmentation and surface reconstruction. Neuroimage 1999; 9: 179–94

    CrossRefPubMedWeb of Science
28. 28.↵
    1. Fischl B,
    2. Sereno MI,
    3. Dale AM

    . Cortical surface-based analysis II: inflation, flattening, and a surface-based coordinate system. Neuroimage 1999; 9: 195–207

    CrossRefPubMedWeb of Science
29. 29.↵
    1. Barnes J,
    2. Ridgway GR,
    3. Bartlett J,
    4. et al

    . Head size, age and gender adjustment in MRI studies: a necessary nuisance? Neuroimage 2010; 53: 1244–55

    CrossRefPubMedWeb of Science
30. 30.↵
    1. Nichols TE,
    2. Holmes AP

    . Nonparametric permutation tests for functional neuroimaging: a primer with examples. Hum Brain Mapp 2001; 15: 1–25

    CrossRefWeb of Science
31. 31.↵
    1. Lin JJ,
    2. Salamon N,
    3. Lee AD,
    4. et al

    . Reduced neocortical thickness and complexity mapped in mesial temporal lobe epilepsy with hippocampal sclerosis. Cereb Cortex 2007; 17: 2007–18

    Abstract/FREE Full Text
32. 32.↵
    1. McDonald CR,
    2. Hagler DJ,
    3. Ahmadi ME,
    4. et al

    . Regional neocortical thinning in mesial temporal lobe epilepsy. Epilepsia 2008; 49: 794–803

    CrossRefPubMedWeb of Science
33. 33.↵
    1. Mueller SG,
    2. Laxer KD,
    3. Barakos J,
    4. et al

    . Involvement of the thalamocortical network in TLE with and without mesiotemporal sclerosis. Epilepsia 2010; 51: 1436–45

    PubMed
34. 34.↵
    1. Ashburner J

    . A fast diffeomorphic image registration algorithm. Neuroimage 2007; 38: 95–113

    CrossRefPubMedWeb of Science